Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865215.1_cds_XP_016432258.1_28522
CDS Infomation

[gene=LOC107758925] [db_xref=GeneID:107758925] [protein=type I inositol polyphosphate 5-phosphatase 12-like] [protein_id=XP_016432258.1] [location=join(26453..26899,27830..28184,28445..28697,28835..29648,30801..30925,31175..31259,31515..31680,31783..31823,31901..32002,32356..32427,32476..32565,32780..32911)] [gbkey=CDS]
Sequence

ATGGACGAAAGCAAAGACGATGATGTGCGTGCATGGGATCAGAATCCGAGTAGCATACAA
CCTGTTCGACAAAATGTTCAATCCAAAAGCCAACAGCTGCGAACATATACGGGGACGCAC
CACAAGCGTGGGCCCCACCAGCACCAGCTCCGCAATAATCGCAGCCTCGATAATCGCATC
ATTAATCACAAGCATAATTATGGTTTGCCGCAAGAGGATTATTTATCAAATGATATTAAA
GGCTCCTCTGATTTGGTTAATCAAAAGATTGAAGGTATTGGGCTGGCGGCGGATGGTTCA
GATGATAACAATCATGAATTGCCATTGCCGGAGTTTGAAGGAACTGGTGGTGGACTTGGA
ATCTTTAAAGTCCCAGTTCGTGCCCCTCTTCATCCTGCACGTCCTTCTTACCTTGAGCTC
AGGCCACACCCCCTCAAAGAAACCCAGGTTGGGAAATTTTTGAGGACCATTGCCTGTACA
GAGACACAACTGTGGGCAGGACAAGAATCTGGGGTAAGAGTGTGGAATTTTTCAGATCAG
TATGAGCCTGGAATGGGAGCTGGAGGTCGTGCAAGGAGAGGGGATGAGGATGCAGCACCA
TTTTATGAGTCGGCTGATATGTCACCCACATTATGTTTGATGGTTGATTCTGGGAATGAG
TTGATCTGGAGTGGGCATAAGGATGGCAAGATTAGGTCTTGGAGAATGGACCAGCCTAGT
TCTAATGACTCCCCTTTCAAGGAAGGCCTCTCCTGGCAGGCTCATCGTGGTCCCGTTCTT
TCAATGGTGATATCTTCTTATGGTGATATATGGTCTGGGTTTGAAGGTGGTATCATAAAG
ATTTGGCCACGTGAAGCAGTAAACAAATCTCTCTCTCTATCACCAGAAGAAACACACATG
GCTGCTTTACTCATGGAAAGGTCATTCGTTGACCTTAGAAGCCAAGTTACAGTGAATGGT
GTATGTAATATCTCGTCTTCTGACGTAAAGTGTTTGCTCTCTGATCATGTAAGAGGAAAA
ATCTGGGCAGCTGGATCTCTATCCTTCTCGTTATGGGATGCTCGGAGTAGGGAACTCCTG
AAAGTGTATAATATAGACGGTCAGATTGAGAATGGGGTTGATATGTCATCGATGCCAGAC
CAAGCAGTGGAAGATGAGAGGAATGTCAAGCTTGTCTCCAAATCTAAAAAAGAAAAGTCA
CAAGGAAGTAACTTTTTCCAGCGTTCACGCAATGCTATAATGGGAGCTGCAGGTGCTGTA
CGTCGAGTTGCAACAAAGGGGGCAGGGGCATTTGCAGAAGATGTTAGGAAAATAGAGGCC
CTTGTGCTTGCATCTGATGGGATGATTTGGAGTGGATGTTCAAATGGCTTACTTGTGCAG
TGGGATGGAAATGGCAATCGTTTGCAAGATTTCCATCATCATCCTTGCGCTGTTCTTTGC
TTATGTGCTCATGGTTCTCGAATATGGGTTGGCTATGTAAGTGGTATGGTACAGGTCCTG
GACCTTGAAGGGAACTTGCTAGCTGGTTGGGTTGCTCACAACAGGCCTGTAATAAAAATG
GCAGTCGGGGATGACTATGTTTTTAGCTTAGCTAATCATGGAGGTATACGTGGATGGGCC
CTCGCCACTCCAGGACCTATTGATAACATATTACTATCAGAAAGAGCTGAGAAAAAATAT
TTATACACCAGACAAGATAATTTTAGGATTTTGGTTGGTACGTGGAACGTTGGTGAAGGA
AAAGCGTCACAGGAAGCACTCGCAACTTGGCTGGGTTCTGCAATTTTGGATGTTGGGATT
GTAGTAATTGGTTTGCAAGAAGTAGAAATGGGAGCAGGTTTTCTTGCAATGTCTGCTGCA
AAAGAAACTGTAGGACTAGAAGGAACTTCTAGTGGGCAATGGTGGCAGGATGCAATAGGA
AAAACTTTGGACGAAGGATCAACTTTCGAAAGGGTAGGATCAAGGCAACTAGCTGGCTTG
CTTATTGCTATCTGGGTGAGAAAAACTCTTAGAGCACATGTGGGGGACCTTGACGTTGCG
GCAGTTGCATGTGGTTTAGGACGTGCGATTGGTAATAAGGGTGGAGTTGGTCTGCGGTTA
AGAGTACTTGATCGGATTATGTGCTTTGTGAACTGTCACTTTGCAGCACATTTAGAAGCA
GTCAACCGCCGCAATGCTGATTTTGATCATATATATAGAACAATGGCTTTCACTCGATCT
TCTAACCTTCTGGACAATGCTGCTGCTGGTGTTTCATCTGCTGCTCAAATGCTTCGTGGT
ACAGATGCTGCAGCAATTAGTCCGGATGAGGGAAAGCCTGACCTTGCTGAAGCTGATATG
GTGATTTTCTGTGGTGATCTTAATTATCGTCTTTTTNCCACAGGTCCGTCGAAAGCTGTT
TATGGTTCACCAAAAGACTACTTGGTTGTAGATATGCATGATTCTTGCCAATTCTTTATT
AGAATGGCTGCTCTGCAAGTCTCTTGCCCTGCATATATGCTGATATGCATGCCAAGAAAC
ATAAAAGATGCTGGATATATTGTGATTCTGTCTCATCAGCTCAAAATCATGTCAAAGGGG
AGAACGAAGAACGTAACAGGTGGACCAAATTTGAAGGATGGAGAGCTCATTCTTGGTGTT
GTCGAAATTTGGCATCATTCAATGACACTTCCATTCATGTGA

Peptide Sequence

PEP ID

XP_016432258.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 12-like [Nicotiana tabacum]
Sequence

MDESKDDDVRAWDQNPSSIQPVRQNVQSKSQQLRTYTGTHHKRGPHQHQLRNNRSLDNRI
INHKHNYGLPQEDYLSNDIKGSSDLVNQKIEGIGLAADGSDDNNHELPLPEFEGTGGGLG
IFKVPVRAPLHPARPSYLELRPHPLKETQVGKFLRTIACTETQLWAGQESGVRVWNFSDQ
YEPGMGAGGRARRGDEDAAPFYESADMSPTLCLMVDSGNELIWSGHKDGKIRSWRMDQPS
SNDSPFKEGLSWQAHRGPVLSMVISSYGDIWSGFEGGIIKIWPREAVNKSLSLSPEETHM
AALLMERSFVDLRSQVTVNGVCNISSSDVKCLLSDHVRGKIWAAGSLSFSLWDARSRELL
KVYNIDGQIENGVDMSSMPDQAVEDERNVKLVSKSKKEKSQGSNFFQRSRNAIMGAAGAV
RRVATKGAGAFAEDVRKIEALVLASDGMIWSGCSNGLLVQWDGNGNRLQDFHHHPCAVLC
LCAHGSRIWVGYVSGMVQVLDLEGNLLAGWVAHNRPVIKMAVGDDYVFSLANHGGIRGWA
LATPGPIDNILLSERAEKKYLYTRQDNFRILVGTWNVGEGKASQEALATWLGSAILDVGI
VVIGLQEVEMGAGFLAMSAAKETVGLEGTSSGQWWQDAIGKTLDEGSTFERVGSRQLAGL
LIAIWVRKTLRAHVGDLDVAAVACGLGRAIGNKGGVGLRLRVLDRIMCFVNCHFAAHLEA
VNRRNADFDHIYRTMAFTRSSNLLDNAAAGVSSAAQMLRGTDAAAISPDEGKPDLAEADM
VIFCGDLNYRLFXTGPSKAVYGSPKDYLVVDMHDSCQFFIRMAALQVSCPAYMLICMPRN
IKDAGYIVILSHQLKIMSKGRTKNVTGGPNLKDGELILGVVEIWHHSMTLPFM

Transcript Sequence

Gene sequence data has not been registered.